Curation and Biodiversity Informatics

The maintenance of museum specimens and catalogues demands great expertise and handling skills. This course introduces core collection procedures, documentation standards, and database management methods, with a clear progression from data generation to data use.

A man points at jar in a specimen collection.

Photo: Martin Stenmark, Naturhistoriska Riksmuseet

The preservation of natural history collections, together with proper documentation, digitization and accessibility, is crucial to meeting today’s societal and scientific challenges. These collections represent a vast reservoir of biodiversity data that can be used to inform conservation strategies, understand species evolution and ecosystem complexity, and assess the impacts of climate and environmental change.

The course is structured in three thematic blocks:

Week 1 focuses on specimen curation and collection management, including preservation methods, documentation practices, and the role of collections in research and society.

Week 2 addresses data mobilization and data standards (data in). Students work with digitization workflows, metadata, data quality, and international standards for biodiversity data, as well as principles such as FAIR and CARE. The emphasis is on preparing and structuring data for integration and publication in national and international repositories.

Week 3 focuses on data use (data out). This part of the course centers on retrieving, processing, analyzing, and interpreting biodiversity data using R. Students work with reproducible workflows and computational tools to explore patterns, assess data quality, and generate meaningful biological insights.

By explicitly linking curation, standardization, mobilization, and analytical reuse, the course highlights the full data lifecycle from specimen to insight.



Learning outcomes

A list of the learning outcomes can be found in the syllabus. Please find the link to the syllabus on the right side of this page.


Examiner

Veronika Johansson
E-mail: veronika.johansson@nrm.se

Lena Thöle
E-mail: lena.thole@nrm.se

The schedule will be available no later than one month before the start of the course. We do not recommend print-outs as changes can occur. At the start of the course, your department will advise where you can find your schedule during the course.
Note that the course literature can be changed up to two months before the start of the course.

No mandatory course literature.

Course reports are displayed for the three most recent course instances.