Research group Group Deng

We explore the intricate relationship between genetics and environmental factors in shaping offspring health. By studying germline development, placental function, and the impact of early-life exposures, we aim to uncover how parental health influences disease risk across generations.


Our research group is interested in the developmental principles of germline specification in health and disease using mouse models and human stem cell cultures coupled with state-of-the-art molecular and cellular tools. Moreover, we investigate how maternal diseases conditions impact the health outcomes of future offspring through the process called developmental programming by placentas and/or germline modulation, a process known as epigenetic inheritance of disease or developmental origins of health and disease (DOHaD). Our current research focuses on polycystic ovary syndrome (PCOS) and diabetes in women taking advantage of disease mouse models, human cohort samples, single-cell sequencing and disease-derived placental organoids in microfluidic co-culture system. 

Germ cells are often considered to be immortal, as they serve as the sole carriers of genetic and epigenetic information across generations, perpetuating life. The germline cycle is a lengthy process, beginning with early gastrulation and continuing through gametogenesis after birth. Any errors that occur during this process can have devastating and long-lasting effects. Recent advances in single-cell sequencing technology have greatly expanded our knowledge of germline development in mammals, but many questions remain unanswered. In this article, we aim to address some of these questions, such as (1) what regulates progenitor competence and how can we define cell quality for germline specification? (2) How is germline specification correlated with epigenetic remodeling including X-chromosome dosage effects? (3) How do certain genetic mutations affect gametogenesis?

Interestingly, there are two waves of epigenetic remodeling that occur after fertilization. These processes ensure the totipotency of the blastocyst for somatic lineage specification and establish a "clean slate" for germ cells, erasing any potentially harmful epigenetic modifications acquired from parents. These processes allow the organism to adapt to changing environmental conditions and minimize the risk of inheriting harmful traits. However, the completeness and faithfulness of these processes still need to be investigated. Increasing evidence shows that parental health conditions can predispose their offspring to develop diseases such as obesity, diabetes, cardiovascular disease, and behavioral disorders through developmental programming, a process called epigenetic inheritance of diseases. Mechanistic understanding of these processes is still sparse. 

We aim to answer questions such as (1) how do parental health conditions affect the germline, which further transmits phenotypic traits? (2) how does the placenta respond to adverse uterine environments, which can systematically modify the cellular and physiological functions of the developing fetues? (3) can we systematically model maternal disease signatures with offspring key organ signatures in humans using organoids and microfluidic coculture?

We are among those pioneers to apply and develop single-cell RNA sequencing (Smart-seq, Smart-seq2, LCM-seq etc). More tools to answer all these interesting questions are mouse disease models, human iPSC culture and differentiation, organoid culture, human sample cohorts and registry data together with other key cellular and molecular assays.

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Dissecting the Impact of Maternal Androgen Exposure on Developmental Programming through... - Lu H, Jiang H, Li C, Derisoud E, Zhao A, Eriksson G, Lindgren E, Pui HP, Risal S, Pei Y, Maxian T, Ohlsson C, Benrick A, Haider S, Stener-Victorin E, Deng Q. Adv Sci (Weinh). 2024 Jul 29:e2309429. doi: 10.1002/advs.202309429.

Appropriate glycemic management protects the germline but not the uterine environment in... - Zhao A, Jiang H, Palomares AR, Larsson A, He W, Grünler J, Zheng X, Rodriguez Wallberg KA, Catrina SB, Deng Q. EMBO Rep. 2024 Apr;25(4):1752-1772. doi: 10.1038/s44319-024-00097-7.

Revealing the molecular landscape of human placenta: a systematic review and meta-analysis of... - Derisoud E, Jiang H, Zhao A, Chavatte-Palmer P, Deng Q. Hum Reprod Update. 2024 Jul 1;30(4):410-441. doi: 10.1093/humupd/dmae006.

Transgenerational transmission of reproductive and metabolic dysfunction in the male progeny of... - Risal S, Li C, Luo Q, Fornes R, Lu H, Eriksson G, Manti M, Ohlsson C, Lindgren E, Crisosto N, Maliqueo M, Echiburú B, Recabarren S, Petermann TS, Benrick A, Brusselaers N, Qiao J, Deng Q, Stener-Victorin E.Cell Rep Med. 2023 May 16;4(5):101035. doi: 10.1016/j.xcrm.2023.101035.

Epiblast-like stem cells established by Wnt/β-catenin signaling manifest distinct features of... - Luo Q, Pui HP, Chen J, Yu L, Jannig PR, Pei Y, Zhao L, Chen X, Petropoulos S, Ruas JL, Wu J, Deng Q. Cell Rep. 2023 Jan 31;42(1):112021. doi: 10.1016/j.celrep.2023.112021.

Transcriptomic survey of key reproductive and metabolic tissues in mouse models of polycystic... - Pei Y, Risal S, Jiang H, Lu H, Lindgren E, Stener-Victorin E, Deng Q. Commun Biol. 2023 Jan 18;6(1):69. doi: 10.1038/s42003-022-04362-0.

ZnT8 loss-of-function accelerates functional maturation of hESC-derived β cells and resists... - Ma Q, Xiao Y, Xu W, Wang M, Li S, Yang Z, Xu M, Zhang T, Zhang ZN, Hu R, Su Q, Yuan F, Xiao T, Wang X, He Q, Zhao J, Chen ZJ, Sheng Z, Chai M, Wang H, Shi W, Deng Q, Cheng X, Li W.Nat Commun. 2022 Jul 16;13(1):4142. doi: 10.1038/s41467-022-31829-9.

Differentiation of Human-Induced Pluripotent Stem Cells (hiPSCs) into Human Primordial Germ... - Reda A, Stukenborg JB, Deng Q. Methods Mol Biol. 2022;2490:235-249. doi: 10.1007/978-1-0716-2281-0_17.

In Vitro Differentiation of Murine Embryonic Stem Cells (ESCs) into Primordial Germ Cell-like... - Pui HP, Deng Q. Methods Mol Biol. 2022;2490:213-233. doi: 10.1007/978-1-0716-2281-0_16.

Epigenetic inheritance of polycystic ovary syndrome - challenges and opportunities for treatment - Stener-Victorin E, Deng Q. Nat Rev Endocrinol. 2021 Sep;17(9):521-533. doi: 10.1038/s41574-021-00517-x.

Spatial RNA Sequencing Identifies Robust Markers of Vulnerable and Resistant Human Midbrain... - Aguila J, Cheng S, Kee N, Cao M, Wang M, Deng Q, Hedlund E. Front Mol Neurosci. 2021 Jul 8;14:699562. doi: 10.3389/fnmol.2021.699562.

Prenatal androgen exposure and transgenerational susceptibility to polycystic ovary syndrome. - Risal S, Pei Y, Lu H, Manti M, Fornes R, Pui HP, Zhao Z, Massart J, Ohlsson C, Lindgren E, Crisosto N, Maliqueo M, Echiburú B, Ladrón de Guevara A, Sir-Petermann T, Larsson H, Rosenqvist MA, Cesta CE, Benrick A, Deng Q, Stener-Victorin E. Nat Med. 2019 Dec;25(12):1894-1904. doi: 10.1038/s41591-019-0666-1.

Single-Cell RNA-Seq Reveals Cellular Heterogeneity of Pluripotency Transition and X Chromosome... - Cheng S, Pei Y, He L, Peng G, Reinius B, Tam PPL, Jing N, Deng Q. Cell Rep. 2019 Mar 5;26(10):2593-2607.e3. doi: 10.1016/j.celrep.2019.02.031.

Single-cell RNA-seq reveals dynamic, random monoallelic gene expression in mammalian cells - Deng Q, Ramsköld D, Reinius B, Sandberg R. Science. 2014 Jan 10;343(6167):193-6. doi: 10.1126/science.1245316.

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From basic science to breakthrough solutions for diabetes

Diabetes is one of the fastest-growing diseases in the world. According to the World Health Organization (WHO), the number of people living with the condition has quadrupled globally since the 1980s. Several major research projects at Stockholm University are exploring fundamental factors that may help prevent or even reverse diabetes, including approaches that aim to activate the body’s own immune system.

Sons of mothers with type 1 diabetes show early signs of vascular dysfunction

A new study reveals that sons born to mothers with type 1 diabetes may develop early vascular dysfunction – independently of metabolic health. The finding may help shape future strategies to prevent cardiovascular disease early in life. Children of women with type 1 diabetes are known to be at increased risk of developing cardiovascular diseases. A new study by researchers from Stockholm University and Karolinska Institutet and others is the first to show that the risk is linked to early dysfunction in blood vessel cells in sons, even before any metabolic issues arise. The study is published in Cell Reports Medicine. The researchers used a combination of animal models, Swedish and Danish health registries, and a small clinical study to explore the link. Results show a sex-specific effect: only sons displayed early vascular changes.

Department of Molecular Biosciences, The Wenner-Gren Institute

How can diabetes during pregnancy affect childrens future health?

Qiaolin Dengs research group want to reveal how diabetes during pregnancy can affect childrens lifelong health—differently in boys and girls. Using advanced molecular tools together with the mouse model and human study, the team aims to uncover the causes and develop targeted treatments This study investigates what affects long-term health outcomes in children to mother with diabetes Qiaolin Deng at the Department of Molecular Biosciences, Wenner-Gren Institute is awarded as Ascending Investigator from Novo Nordisk Foundation Research Leader Program  to investigate how maternal diabetes despite of good glycemic control during pregnancy can still affect childrens cardiometabolic health differently throughout their lives. The study aims to understand the key “programming” molecules secreted from the placenta on tissue development and function and why sons and daughters of diabetic mothers face different health risks as they grow up. Bridging the research gap to improve patient care and children’s health Although therapeutic advances in blood glucose control have greatly improved the overall health of patients with type 1 diabetes (T1D), pregnancy in these women still carries a significantly higher risk of complications that can affect their childrens health both in the short and long term.

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