Research group Group Sverremark-Ekström

We study host-microbe interactions and mechanisms that influence immune characteristics and functionality.


Our immune system gradually matures during the first year(s) of life under the influence of various environmental exposures. A prominent environmental factor in this context, is the gut microbiota. The molecular interactions between the early microbiota and the host promote immune development and maturation. Disturbances during this early process generating microbial deprivation/deviation, could result in poor infant immune maturation and/or altered immune balance, with an increased risk of immune-mediated disease later in life.

Our main research goals are to understand biological mechanisms behind (gut) microbe-induced immune modulation. We investigate different mechanisms in the gut microbe-host cross-talk, including detailed analyses of exposed immune cells at DNA, RNA and protein levels but also which microbial factors that are involved. Further, we examine how these early events contribute to the development of immune mediated diseases like allergy and how immunotherapy influence the gut-immune interactions. We also aim to understand how the microbiota contributes to chemotherapy efficacy and toxicity as well as to the recovery of immune functions after cancer treatment. We perform cellular and molecular experimental studies in vitro, complemented by in vivo studies and work with human clinical samples.

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Staphylococcus aureus-derived factors promote human Th9 cell polarization and enhance a - transcriptional program associated with allergic inflammation. Badolati I, van der Heiden M, Brodin D, Zuurveld M, Szilágyi S, Björkander S, Sverremark-Ekström E. Eur J Immunol. 2023 Mar;53(3):e2250083. doi: 10.1002/eji.202250083.

Extracellular membrane vesicles from Limosilactobacillus reuteri strengthen the intestinal - epithelial integrity, modulate cytokine responses and antagonize activation of TRPV1. Pang Y, Ermann Lundberg L, Mata Forsberg M, Ahl D, Bysell H, Pallin A, Sverremark-Ekström E, Karlsson R, Jonsson H, Roos S. Front Microbiol. 2022 Nov 17;13:1032202. doi: 10.3389/fmicb.2022.1032202. eCollection 2022.

Gut commensal Limosilactobacillus reuteri induces atypical memory-like phenotype in human dendritic - cells in vitro. Lasaviciute G, Barz M, van der Heiden M, Arasa C, Tariq K, Quin J, Östlund Farrants AK, Sverremark-Ekström E. Gut Microbes. 2022 Jan-Dec;14(1):2045046. doi: 10.1080/19490976.2022.2045046. PMID: 35258405

Activation of human γδ T cells and NK cells by Staphylococcal enterotoxins requires both monocytes - and conventional T cells. Mata Forsberg M, Arasa C, van Zwol W, Uzunçayir S, Schönbichler A, Regenthal P, Schelin J, Lindkvist-Petersson K, Björkander S, Sverremark-Ekström E. J Leukoc Biol. 2021 Jun 11. doi: 10.1002/JLB.3A1020-630RR. Online ahead of print.

Extreme prematurity and sepsis strongly influence frequencies and functional characteristics of - circulating γδ T and natural killer cells. Rahman Qazi K, Jensen GB, van der Heiden M, Björkander S, Marchini G, Jenmalm MC, Abrahamsson T, Sverremark-Ekström E. Clin Transl Immunology. 2021 Jun 10;10(6):e1294. doi: 10.1002/cti2.1294

T Cell Subsets During Early Life and Their Implication in the Treatment of Childhood Acute - Lymphoblastic Leukemia. Saghafian-Hedengren S, Sverremark-Ekström E, Nilsson A. Front Immunol. 2021 Mar 4;12:582539. doi: 10.3389/fimmu.2021.582539. eCollection 2021.

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Department of Molecular Biosciences, The Wenner-Gren Institute

Studying the link between gut microbiota and allergy risk

Human microbiota-associated (HMA) models are used to allow in vivo studies of the human gut microbiome and its effects on host physiology. In particular, alterations in early life microbiota have been linked to allergy development during childhood. In this study, Ymke de Jong et al investigated how pools of human microbiota collected from infants with different allergy risk thrive in mice and their offspring, as well as how they influence the host metabolome.  

Department of Molecular Biosciences, The Wenner-Gren Institute

Exploring Immune Response Staphylococcal Enterotoxin A - Interview with Clàudia Arasa Cuartiella

On Friday, April 4, 2025, Clàudia Arasa Cuartiella will defend her doctoral thesis, “Unraveling the immune response to Staphylococcal Enterotoxin A – From calm seas to cytokine storms: navigating the superantigenic tide”, at Stockholm University. Her research delves into how Staphylococcal Enterotoxin A (SEA), a virulence factor of Staphylococcus aureus, interacts with the immune system. Before the defence, we have had the opportunity to have a short interview.

Department of Molecular Biosciences, The Wenner-Gren Institute

Study shows that preterm infants may be more vulnarable to microbal exposure

In a new study, Group Sverremark-Ekström shows that extremely preterm infants have monocyte characteristics and functional features that deviate from infants born full-term. Some of these differences persist until they reach an age corresponding to full-term, potentially making them more vulnerable to microbial exposures during the first months of life.

Department of Molecular Biosciences, The Wenner-Gren Institute

Group Sverremark-Ekström publishes in European Journal of Immunology

Staphylococcus aureus-derived factors promote human Th9 cell polarization and enhance a transcriptional program associated with allergic inflammation Abstract T helper (Th) 9 cells, characterized by robust secretion of IL-9, have been increasingly associated with allergic diseases. However, whether and how Th9 cells are modulated by environmental stimuli remains poorly understood. In this study, we show that in vitro exposure of human PBMCs or isolated CD4 T-cells to Staphylococcus (S.) aureus-derived factors, including its toxins, potently enhances Th9 cell frequency and IL-9 secretion. Furthermore, as revealed by RNA sequencing analysis, S. aureus increases the expression of Th9-promoting factors at the transcriptional level, such as FOXO1, miR-155, and TNFRSF4. The addition of retinoic acid (RA) dampens the Th9 responses promoted by S. aureus and substantially changes the transcriptional program induced by this bacterium, while also altering the expression of genes associated with allergic inflammation. Together, our results demonstrate a strong influence of microbial and dietary factors on Th9 cell polarization, which may be important in the context of allergy development and treatment. Read the full article

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