Stockholms universitet

Kinlan JanDoktorand

Om mig

I am a PhD student in Marine Biology. My project aims to give a better description of the plankton-fish link using novel molecular tools. Planktivorous fish are key components of the pelagic food web as they support upper trophic levels, such as commercially important fish, and indirectly control algal growth by feeding on zooplankton. Although understanding the interactions between plankton and fish is crucial for the development of ecosystem-based management strategies, the full spectrum of planktivorous fish prey is rarely considered, mostly due to limitations of the methods. In this project, DNA metabarcoding on low levels of dietary DNA (dDNA) and modeling will be used to investigate the full prey spectrum of planktivorous fish. The outcome of the project will provide a better understanding on the plankton-fish interactions and help predict the variation of energy flow from primary producer to fish under different scenarios, such as climate warming, eutrophication and fisheries.

 

The project has four main objectives:

  1. Establishment of the accuracy of the molecular approach to prey estimation.
  2. Assessment of the spatial and temporal dynamics of zooplankton-fish interactions
  3. Investigation of the relationship between prey quantity, types, and traits, and fish feeding strategy.
  4. Predicting change of pelagic food web interactions in time and space, and their responses to current and future anthropogenic perturbations.

Forskningsprojekt

Publikationer

I urval från Stockholms universitets publikationsdatabas

  • Plankton blooms over the annual cycle shape trophic interactions under climate change

    2024. Kinlan M. G. Jan (et al.). Limnology and Oceanography Letters 9 (3), 209-218

    Artikel

    Understanding species phenology and temporal co-occurrence across trophic levels is essential to assess anthropogenic impacts on ecological interactions. We analyzed 15 yr of monitoring data to identify trends and drivers of timing and magnitude of bloom-forming phytoplankton and diverse zooplankton taxa in the central Baltic Sea. We show that the timings of phytoplankton blooms advance, whereas crustacean zooplankton seasonal timings remain constant. This increasing offset with the spring bloom is linked to the decline of Pseudocalanus, a key copepod sustaining pelagic fish production. The majority of copepod and cladoceran taxa, however, are co-occurring with summer blooms. We also find new developing fall blooms, fueling secondary production later in the season. Our study highlights that response to climate change differs within and between functional groups, stressing the importance of investigating plankton phenologies over the entire annual cycle in pelagic systems.

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  • Spatial distribution projections of suitable environmental conditions for key Baltic Sea zooplankton species

    2024. Baptiste Serandour (et al.). Limnology and Oceanography 69 (12), 2801-2814

    Artikel

    Environmental changes reshape biological communities, inducing cascading effects throughout the food webs. These changes pressure species either to adapt or to track favorable habitats. Estuaries represent an interesting case study to investigate such responses as species will rapidly reach physical boundaries if they cannot adapt fast enough and need to track suitable conditions. One such estuary is the Baltic Sea, characterized by a salinity and temperature gradient that shapes species distribution and imposes physiological stress on organisms. The Baltic Sea is projected to be affected by substantial modifications in environmental conditions by the end of the 21st century, which could have major consequences for species distribution and community composition. However, despite the impending changes and their potential impact, there is a gap in understanding the potential consequences on pelagic species of the Baltic Sea. This study employs long-term observations of primary zooplankton species in the pelagic food web to model changes in their distribution under future climate projections. We found that the parameters having the largest influence on habitat suitability varied across species, although maximal temperature was the most important for six out of seven species. In addition, there was a shrinkage of suitable area for several key species driven by a decrease in salinity and a rise in water temperature. We discuss the complex interplay between environmental changes and the spatial distribution of pelagic species in the Baltic Sea, highlighting the need for proactive management strategies to mitigate potential ecological impacts in the face of future climate scenarios.

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  • DNA metabarcoding highlights cyanobacteria as the main source of primary production in a pelagic food web model

    2023. Andreas Novotny (et al.). Science Advances 9 (17)

    Artikel

    Models that estimate rates of energy flow in complex food webs often fail to account for species-specific prey selectivity of diverse consumer guilds. While DNA metabarcoding is increasingly used for dietary studies, methodological biases have limited its application for food web modeling. Here, we used data from dietary metabarcoding studies of zooplankton to calculate prey selectivity indices and assess energy fluxes in a pelagic resource-consumer network. We show that food web dynamics are influenced by prey selectivity and temporal match-mismatch in growth cycles and that cyanobacteria are the main source of primary production in the investigated coastal pelagic food web. The latter challenges the common assumption that cyanobacteria are not supporting food web productivity, a result that is increasingly relevant as global warming promotes cyanobacteria dominance. While this study provides a method for how DNA metabarcoding can be used to quantify energy fluxes in a marine food web, the approach presented here can easily be extended to other ecosystems. 

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  • Opportunistic vs selective feeding strategies of zooplankton under changing environmental conditions 

    2023. Baptiste Serandour (et al.). Journal of Plankton Research 45 (2), 389-403

    Artikel

    The plankton community consists of diverse interacting species. The estimation of species interactions in nature is challenging. There is limited knowledge on how plankton interactions are influenced by environmental conditions because of limited understanding of zooplankton feeding strategies and factors affecting trophic interactions. In this study, we used DNA-metabarcoding to investigate trophic interactions in mesozooplankton predators and the influence of prey availability on their feeding behavior. We found that mesozooplankton feeding strategies vary within species across an environmental gradient. Some species, such as Temora longicornis consistently used a selective strategy, while diets of Centropages hamatus and Acartia spp. varied between stations, showing a trophic plasticity with the prey community. We found a dominance of Synechococcales reads in Temora’s gut content and a high prey diversity for the cladoceran Evadne nordmanni. Our study shows the wide range of prey species that supports mesozooplankton community and helps to understand the spatial and temporal complexity of plankton species interactions and discriminate the selectivity ability of four zooplankton key species. Due to the central role of plankton in marine waters, a better comprehension of the spatiotemporal variability in species interactions helps to estimate fluxes to benthic and pelagic predators. 

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  • Niche partitioning between planktivorous fish in the pelagic Baltic Sea assessed by DNA metabarcoding, qPCR and microscopy

    2022. Andreas Novotny (et al.). Scientific Reports 12

    Artikel

    Marine communities undergo rapid changes related to human-induced ecosystem pressures. The Baltic Sea pelagic food web has experienced several regime shifts during the past century, resulting in a system where competition between the dominant planktivorous mesopredatory clupeid fish species herring (Clupea harengus) and sprat (Sprattus sprattus) and the rapidly increasing stickleback (Gasterosteus aculeatus) population is assumed to be high. Here, we investigate diet overlap between these three planktivorous fishes in the Baltic Sea, utilizing DNA metabarcoding on the 18S rRNA gene and the COI gene, targeted qPCR, and microscopy. Our results show niche differentiation between clupeids and stickleback, and highlight that rotifers play an important role in this pattern, as a resource that is not being used by the clupeids nor by other zooplankton in spring. We further show that all the diet assessment methods used in this study are consistent, but also that DNA metabarcoding describes the plankton-fish link at the highest taxonomic resolution. This study suggests that rotifers and other understudied soft-bodied prey may have an important function in the pelagic food web and that the growing population of pelagic stickleback may be supported by the open feeding niche offered by the rotifers.

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